IMP
2.0.0
The Integrative Modeling Platform
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Files | |
file | AmbiguousNOERestraint.h [code] |
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. | |
file | AmbiguousRestraint.h [code] |
An implementation of the d-norm to make an ambiguous restraint. | |
file | bivariate_functions.h [code] |
Classes for general functions. | |
file | FNormal.h [code] |
Normal distribution of Function. | |
file | GaussianProcessInterpolation.h [code] |
Normal distribution of Function. | |
file | GaussianProcessInterpolationRestraint.h [code] |
Restraint and ScoreState for GaussianProcessInterpolation. | |
file | GaussianProcessInterpolationRestraintSparse.h [code] |
Normal distribution of Function. | |
file | GaussianProcessInterpolationSparse.h [code] |
Normal distribution of Function. | |
file | GaussianRestraint.h [code] |
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. | |
file | HybridMonteCarlo.h [code] |
A hybrid monte carlo implementation. | |
file | isd_config.h [code] |
file | ISDRestraint.h [code] |
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. | |
file | JeffreysRestraint.h [code] |
A restraint on a scale parameter. | |
file | LogicalORRestraint.h [code] |
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. | |
file | LognormalRestraint.h [code] |
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. | |
file | MaintainScaleOrderConstraint.h [code] |
Constrain scales to be ordered and positive. | |
file | MarginalHBondRestraint.h [code] |
A lognormal restraint that uses the ISPA model to model HBond-derived distance fit. | |
file | MarginalNOERestraint.h [code] |
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. | |
file | isd/MolecularDynamics.h [code] |
Simple molecular dynamics optimizer. | |
file | MolecularDynamicsMover.h [code] |
A modifier which perturbs XYZs or Nuisances with a constant energy MD simulation. | |
file | MultivariateFNormalSufficient.h [code] |
Normal distribution of Function. | |
file | MultivariateFNormalSufficientSparse.h [code] |
Normal distribution of Function. | |
file | NOERestraint.h [code] |
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. | |
file | Nuisance.h [code] |
A decorator for nuisance parameters particles. | |
file | NuisanceRangeModifier.h [code] |
A singleton modifier which wraps an attribute into a given range. | |
file | RepulsiveDistancePairScore.h [code] |
A simple quadric repulsive term between two atoms. Restraint is zero when the distance equals the sum of the radii plus the shift. | |
file | Scale.h [code] |
A decorator for scale parameters particles. | |
file | SlidingPriorRestraint.h [code] |
A restraint on a scale parameter. | |
file | Switching.h [code] |
A decorator for switching parameters particles. | |
file | TALOSRestraint.h [code] |
TALOS dihedral restraint between four particles. | |
file | univariate_functions.h [code] |
Classes for general functions. | |
file | vonMises.h [code] |
Normal distribution of Function. | |
file | vonMisesKappaConjugateRestraint.h [code] |
Conjugate prior for \(\kappa\) in the von Mises distribution. | |
file | vonMisesKappaJeffreysRestraint.h [code] |
Jeffreys prior for \(\kappa\) in the von Mises distribution. | |
file | vonMisesSufficient.h [code] |
Normal distribution of Function. | |