This patch cleans up the code for the attribute arrays in decorators. In
terms of API changes it adds a method to get the ith residue from a
protein or chain or nucleotide. It also now enforces the create/cast
distinction with bonds, bonded and hierarchy nodes (previously any node
was a hierarchy node without having create cast on it).
Committed as r591, but this breaks the example chain.py. Can you fix
that, please?
cd /Users/ben/imp/kernel/doc/examples && /Users/ben/imp/bin/imppy.sh
python chain.py > /dev/null
Traceback (most recent call last):
File "chain.py", line 29, in <module>
bpr= IMP.BondedDecorator.cast(chain[i-1])
ValueError: Particle missing required attribues in cast
examples FAILED
Ben
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"It is a capital mistake to theorize before one has data."
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