Daniel, you mentioned in your original email: " if you used the default get_interacting_particles, (you are probably doing a bad thing), you would also have to add ParticlesList get_interacting_particles() const { return ParticlesList(1, Particles(particles_begin(), particles_end())); } in your header. " The DOMINO optimizer is using get_interacting_particles to build the restraint graph of the particles. In addition, In assembler Frido and I use this function for analysis purposes. If you are going a head with your change - can you please make sure that all of the existing restraints ( maybe except for non-bonded) implement this function? thanks, Keren. On Jan 16, 2009, at 12:25 PM, Daniel Russel wrote:
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