Package: imp-dev Architecture: amd64 Version: 20240519.develop.031dafb4d2-1 Priority: optional Section: libdevel Source: imp Maintainer: Ben Webb Installed-Size: 7033 Depends: imp (= 20240519.develop.031dafb4d2-1), cmake, swig, libboost-filesystem-dev, libboost-graph-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-random-dev, libboost-regex-dev, libboost-thread-dev, libcgal-dev, libhdf5-dev, libfftw3-dev, libopencv-dev, libgsl0-dev, python3-dev, libann-dev, libeigen3-dev, libcereal-dev, libprotobuf-dev Filename: focal/imp-dev_20240519.develop.031dafb4d2-1_amd64.deb Size: 931996 MD5sum: 2fb60740c0e0eeee78fdb68075ab46a9 SHA1: faf2e3b8dc944269d1b2829ad5c6f4925a72f3cf SHA256: e4a3ff9236d7a757eaf80b4258081bf01364baff8ee04a5e0244da626be27656 SHA512: d87db88b520f3e36d533eb000e69ea9309ba38a260a91d1d8c9f5a56764ea1d31696b79cdae6c1f89f5c99db4cc278e0b32dd25523d12042ede34c5b074a9e32 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform Headers to compile against IMP. Package: imp-openmpi Architecture: amd64 Version: 20240519.develop.031dafb4d2-1 Priority: optional Section: libs Source: imp Maintainer: Ben Webb Installed-Size: 12308 Depends: imp (= 20240519.develop.031dafb4d2-1), libboost-filesystem1.71.0, libboost-program-options1.71.0, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libopencv-core4.2 (>= 4.2.0+dfsg), libopencv-imgcodecs4.2 (>= 4.2.0+dfsg), libopenmpi3 (>= 4.0.3), libstdc++6 (>= 9), python3-mpi4py Filename: focal/imp-openmpi_20240519.develop.031dafb4d2-1_amd64.deb Size: 1450944 MD5sum: d829b7681160a07bc004ec125a6a1e28 SHA1: 64c402a4f2b3df888d2a5de2f24641ca22698eaa SHA256: 4c93a4b2ee06ce5237afa6296f17f727bcc3cc7d39d640d7ec54197f3454fafa SHA512: cbc9e4dceb50bbf8e38abfb02d1573714e320b61f78d8901eb29ef907596feeab0cc0eb08ed797b201d36709d33dbe6e8e95eab2a854ed15f0b42ed476ac462a Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP MPI module and dependents, for openmpi. Package: imp-python2 Architecture: amd64 Version: 20240519.develop.031dafb4d2-1 Priority: optional Section: libs Source: imp Maintainer: Ben Webb Installed-Size: 120610 Depends: imp (= 20240519.develop.031dafb4d2-1), python-numpy, python-protobuf Filename: focal/imp-python2_20240519.develop.031dafb4d2-1_amd64.deb Size: 15230732 MD5sum: e6f599925c060b0e4945b99b21aad911 SHA1: 34cdd9224e9a1e088a27b8acec28ac98f7747ae2 SHA256: b99164c653837ecc23f0713acd7e68cdb795ac4052e9926992f7c6648d395d5d SHA512: 379794b3e4f3120616ef4656e0198470d667ac19c87b17698fab91b40036f89936b20ba55f66dd47d03b792e7ac21f22b0fb0df83e01164794f2566d762170d4 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform Wrappers for Python 2 (the base IMP package contains Python 3 wrappers). Package: imp Architecture: amd64 Version: 20240519.develop.031dafb4d2-1 Priority: optional Section: libs Maintainer: Ben Webb Installed-Size: 804131 Depends: libboost-filesystem1.71.0, libboost-graph1.71.0, libboost-iostreams1.71.0, libboost-program-options1.71.0, libboost-random1.71.0, libc6 (>= 2.29), libfftw3-double3 (>= 3.3.5), libgcc-s1 (>= 4.0), libgmp10, libgomp1 (>= 4.9), libgsl23 (>= 2.5), libhdf5-103, libmpfr6 (>= 3.1.3), libopencv-core4.2 (>= 4.2.0+dfsg), libopencv-imgcodecs4.2 (>= 4.2.0+dfsg), libopencv-imgproc4.2 (>= 4.2.0+dfsg), libprotobuf17, libstdc++6 (>= 9), python3-numpy, python3-protobuf, python3-yaml Breaks: imp-python3 (<< 2.13.0) Replaces: imp-python3 (<< 2.13.0) Filename: focal/imp_20240519.develop.031dafb4d2-1_amd64.deb Size: 61921184 MD5sum: 326275bd95bccce045fe390e8f7fb758 SHA1: 12f497e76e561df9af5aaee465b58301d5681857 SHA256: 58042aa2787085d1ef63a2d1e734790ec1f4c1aee045aab1f87c8519504ace0a SHA512: 99963e8ee431eda87fe303c11f8e26d98f404ae201f370d069bc59658041378034c9719d247982eb7fd8c78778cb0d5c9a2fe48d98e40fac04471b054cf108f0 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP's broad goal is to contribute to a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies. Detailed structural characterization of assemblies is generally impossible by any single existing experimental or computational method. This barrier can be overcome by hybrid approaches that integrate data from diverse biochemical and biophysical experiments (eg, x-ray crystallography, NMR spectroscopy, electron microscopy, immuno-electron microscopy, footprinting, chemical cross-linking, FRET spectroscopy, small angle X-ray scattering, immunoprecipitation, genetic interactions, etc...). . We formulate the hybrid approach to structure determination as an optimization problem, the solution of which requires three main components: * the representation of the assembly, * the scoring function and * the optimization method. . The ensemble of solutions to the optimization problem embodies the most accurate structural characterization given the available information. . We created IMP, the Integrative Modeling Platform, to make it easier to implement such an integrative approach to structural and dynamics problems. IMP is designed to allow mixing and matching of existing modeling components as well as easy addition of new functionality.