Package: imp-dev Architecture: amd64 Version: 20240520.develop.031dafb4d2-1 Priority: optional Section: libdevel Source: imp Maintainer: Ben Webb Installed-Size: 6980 Depends: imp (= 20240520.develop.031dafb4d2-1), cmake, swig, libboost-filesystem-dev, libboost-graph-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-random-dev, libboost-regex-dev, libboost-thread-dev, libcgal-dev, libhdf5-dev, libfftw3-dev, libopencv-dev, libgsl0-dev, python3-dev, libann-dev, libeigen3-dev, libcereal-dev, libprotobuf-dev Filename: noble/imp-dev_20240520.develop.031dafb4d2-1_amd64.deb Size: 940554 MD5sum: 3ebdf71f35975d9e6bfbd1d31da51bce SHA1: ec977f2db83e77b95651070559b1dd7d3b034537 SHA256: 63c3f22ad9fddfd601099c1bb25db7ef24fc847b228e1f1d159c37301f5dc8a4 SHA512: 16716c5b16b4100f74bdd74dd2f04e3c13500245437732f8d80308b3e7f969573e70087e375430d6720b51fa4ad5710d48f3a0f869d1f8ca2cd8001325e9d281 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform Headers to compile against IMP. Package: imp-openmpi Architecture: amd64 Version: 20240520.develop.031dafb4d2-1 Priority: optional Section: libs Source: imp Maintainer: Ben Webb Installed-Size: 11649 Depends: imp (= 20240520.develop.031dafb4d2-1), libboost-filesystem1.83.0 (>= 1.83.0), libboost-program-options1.83.0 (>= 1.83.0), libc6 (>= 2.38), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libopencv-core406t64 (>= 4.6.0+dfsg), libopencv-imgcodecs406t64 (>= 4.6.0+dfsg), libopenmpi3t64 (>= 4.1.6), libstdc++6 (>= 13.1), python3-mpi4py Filename: noble/imp-openmpi_20240520.develop.031dafb4d2-1_amd64.deb Size: 1532098 MD5sum: a6e8f10609eaf4b48391573ff2c2f3db SHA1: a36fd8b63917b8b1f5819163e3619989cab6308f SHA256: 6e154e576d2fdd1b8e8b81e73af88cf8c929caf2efc30a0329b228f2c311e740 SHA512: f803e696caf79086b734427e33c8520d11f72aebd99979a161b313af6a891bb06bb54b862e676c860da282d55a663f91e4853b1416cedfeeea105b59d3da1e61 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP MPI module and dependents, for openmpi. Package: imp Architecture: amd64 Version: 20240520.develop.031dafb4d2-1 Priority: optional Section: libs Maintainer: Ben Webb Installed-Size: 795754 Depends: libboost-filesystem1.83.0 (>= 1.83.0), libboost-graph1.83.0 (>= 1.83.0), libboost-iostreams1.83.0 (>= 1.83.0), libboost-program-options1.83.0 (>= 1.83.0), libboost-random1.83.0 (>= 1.83.0), libc6 (>= 2.38), libfftw3-double3 (>= 3.3.10), libgcc-s1 (>= 4.0), libgmp10 (>= 2:6.3.0+dfsg), libgomp1 (>= 4.9), libgsl27 (>= 2.7.1), libhdf5-103-1t64, libmpfr6 (>= 3.1.3), libopencv-core406t64 (>= 4.6.0+dfsg), libopencv-imgcodecs406t64 (>= 4.6.0+dfsg), libopencv-imgproc406t64 (>= 4.6.0+dfsg), libprotobuf32t64 (>= 3.21.12), libstdc++6 (>= 13.1), python3-numpy, python3-protobuf, python3-yaml Breaks: imp-python3 (<< 2.13.0) Replaces: imp-python3 (<< 2.13.0) Filename: noble/imp_20240520.develop.031dafb4d2-1_amd64.deb Size: 64494516 MD5sum: e13ad7bfc200c6723b795aea5d9c47f0 SHA1: 7da62fb8129ab0ea34d4ee3c6fffe4c55d5156ec SHA256: 02070eace3fe083d9a3a0a02e5185f5284b1db3a744d6ef8ced7191590a88bee SHA512: 3e95cf445b9ac8fcb50d9b21c3530f640173a2b1252d9ce221035933548b8ea3755770d3641ba74b6dae1c98cef1d7ae182c0d0cff42e5e0f205998c3d9d4877 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP's broad goal is to contribute to a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies. Detailed structural characterization of assemblies is generally impossible by any single existing experimental or computational method. This barrier can be overcome by hybrid approaches that integrate data from diverse biochemical and biophysical experiments (eg, x-ray crystallography, NMR spectroscopy, electron microscopy, immuno-electron microscopy, footprinting, chemical cross-linking, FRET spectroscopy, small angle X-ray scattering, immunoprecipitation, genetic interactions, etc...). . We formulate the hybrid approach to structure determination as an optimization problem, the solution of which requires three main components: * the representation of the assembly, * the scoring function and * the optimization method. . The ensemble of solutions to the optimization problem embodies the most accurate structural characterization given the available information. . We created IMP, the Integrative Modeling Platform, to make it easier to implement such an integrative approach to structural and dynamics problems. IMP is designed to allow mixing and matching of existing modeling components as well as easy addition of new functionality.