These were generated by the Ubuntu 24.04 (Noble Numbat) 64-bit package; Boost 1.83, gcc 13.2, Python 3.
See also:
| [+] | Name | Runtime (s) | State | Delta |
|---|---|---|---|---|
| [+] | test_MarginalNOERestraint.py ======================================================================
SKIP: Tests.testDerivative
----------------------------------------------------------------------
derivatives currently broken
======================================================================
SKIP: Tests.testValueEDist1
----------------------------------------------------------------------
energy currently broken
======================================================================
SKIP: Tests.testValueEDist2
----------------------------------------------------------------------
energy currently broken
======================================================================
EXPFAIL: Tests.testValueGammaHat
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-1/imp/modules/isd/test/test_MarginalNOERestraint.py", line 149, in testValueGammaHat
self.m.add_restraint(self.noe)
^^^^^^^^^^^^^^^^^^^^
AttributeError: 'Model' object has no attribute 'add_restraint'
======================================================================
SKIP: Tests.testValuePDist1
----------------------------------------------------------------------
probability currently broken
======================================================================
SKIP: Tests.testValuePDist2
----------------------------------------------------------------------
probability currently broken
======================================================================
EXPFAIL: Tests.testValueSS
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-1/imp/modules/isd/test/test_MarginalNOERestraint.py", line 177, in testValueSS
self.m.add_restraint(self.noe)
^^^^^^^^^^^^^^^^^^^^
AttributeError: 'Model' object has no attribute 'add_restraint'
|
0.26 | SKIP_EXPFAIL | |
| [+] | test_GaussianProcessInterpolation.py ======================================================================
EXPFAIL: Tests.testDOFSigma
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-1/imp/modules/isd/test/test_GaussianProcessInterpolation.py", line 465, in testDOFSigma
self.fail("Do some mathematica first")
AssertionError: Do some mathematica first
|
0.31 | EXPFAIL | |
| [+] | test_TALOSRestraint.py ====================================================================== SKIP: Tests.testValueDKappa1 ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testValueDKappa2 ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testValueEDist ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testValueEKappa ---------------------------------------------------------------------- this test requires the scipy Python module |
0.29 | SKIP | |
| [+] | test_TuneRex.py ====================================================================== SKIP: Tests.test_flux ---------------------------------------------------------------------- test requires the rpy2 module ====================================================================== SKIP: Tests.test_repnums ---------------------------------------------------------------------- test requires the rpy2 module |
0.30 | SKIP | |
| [+] | test_vonMises.py ====================================================================== SKIP: Tests.testDensity ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testEvaluate ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testEvaluateDKappa ---------------------------------------------------------------------- this test requires the scipy Python module |
0.28 | SKIP | |
| [+] | test_vonMisesKappaConjugateRestraint.py ====================================================================== SKIP: Tests.testDerivativeKappa ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testValueEKappa ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testValueER0 ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testValueEc ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testValuePKappa ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testValuePR0 ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testValuePc ---------------------------------------------------------------------- this test requires the scipy Python module |
0.29 | SKIP | |
| [+] | test_vonMisesKappaJeffreysRestraint.py ====================================================================== SKIP: Tests.testDerivative ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testValueE ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.testValueP ---------------------------------------------------------------------- this test requires the scipy Python module |
0.28 | SKIP | |
| [+] | test_vonMisesSufficient.py ====================================================================== SKIP: TestvonMisesSufficient.testDensity ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: TestvonMisesSufficient.testEvaluate ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: TestvonMisesSufficient.testEvaluateDKappa ---------------------------------------------------------------------- this test requires the scipy Python module |
0.30 | SKIP | |
| [+] | test_NuisanceScoreState.py ====================================================================== SKIP: TestNuisanceScoreState.test_NormalMover_MC_fails ---------------------------------------------------------------------- ScoreState won't be called with no restraints that use it |
0.29 | SKIP | |
| [+] | test_FStudentT.py ====================================================================== SKIP: Tests.test_create_from_sufficient_statistics ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: Tests.test_evaluate ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: Tests.test_evaluate_DFM ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: Tests.test_evaluate_DFX ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: Tests.test_evaluate_DLogJX ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: Tests.test_evaluate_Dnu ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: Tests.test_evaluate_Dsigma ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: Tests.test_get_density ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: Tests.test_setters_getters ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: Tests.test_update_sufficient_statistics ---------------------------------------------------------------------- No scipy.special module |
0.24 | SKIP | |
| [+] | test_StudentTRestraint.py ====================================================================== SKIP: TestCase.test_all_setup_combinations ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: TestCase.test_derivative_dmu ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: TestCase.test_derivative_dnu ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: TestCase.test_derivative_dsigma ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: TestCase.test_derivative_dx ---------------------------------------------------------------------- No scipy.special module ====================================================================== SKIP: TestCase.test_evaluate ---------------------------------------------------------------------- No scipy.special module |
0.28 | SKIP | |
| [+] | medium_test_create_gmm.py ====================================================================== SKIP: Tests.test_from_mrc ---------------------------------------------------------------------- this test requires the sklearn Python module ====================================================================== SKIP: Tests.test_from_pdb ---------------------------------------------------------------------- this test requires the sklearn Python module ====================================================================== SKIP: Tests.test_from_pdb_chain ---------------------------------------------------------------------- this test requires the sklearn Python module |
0.68 | SKIP | |
| [+] | test_GammaPrior.py ====================================================================== SKIP: Tests.test_evaluate_at ---------------------------------------------------------------------- this test requires the scipy Python module ====================================================================== SKIP: Tests.test_unprotected_evaluate ---------------------------------------------------------------------- this test requires the scipy Python module |
0.24 | SKIP | |
| [+] | medium_test_gaussian_em_restraint.py ======================================================================
FAIL: Tests.test_gem_score
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-1/imp/modules/isd/test/medium_test_gaussian_em_restraint.py", line 196, in test_gem_score
self.assertAlmostEqual(score, pyscore, delta=0.02)
AssertionError: 3.2147896340119337 != 3.2355013239145136 within 0.02 delta (0.020711689902579877 difference)
|
0.82 | FAIL | NEWFAIL |
| test_AmbiguousNOERestraint.py | 0.28 | OK | ||
| test_Covariance1DFunction.py | 0.49 | OK | ||
| test_FNormal.py | 0.27 | OK | ||
| test_GaussianProcessInterpolationNumerically.py | 0.48 | OK | ||
| test_GaussianProcessInterpolationNumericallyNoMean.py | 0.37 | OK | ||
| test_GaussianProcessInterpolationNumericallyNoSigma.py | 0.36 | OK | ||
| test_GaussianProcessInterpolationRestraint.py | 0.56 | OK | ||
| test_GaussianRestraint.py | 0.32 | OK | ||
| test_GeneralizedGuinierPorodFunction.py | 0.30 | OK | ||
| test_JeffreysRestraint.py | 0.24 | OK | ||
| test_Linear1DFunction.py | 0.25 | OK | ||
| test_LognormalRestraint.py | 0.32 | OK | ||
| test_MarginalHBondRestraint.py | 0.31 | OK | ||
| test_MolecularDynamicsMover.py | 0.25 | OK | ||
| test_MolecularDynamicsNuisance.py | 0.30 | OK | ||
| test_MolecularDynamicsXYZ.py | 0.31 | OK | ||
| test_NOERestraint.py | 0.32 | OK | ||
| test_Nuisance.py | 0.26 | OK | ||
| test_Replica.py | 1.69 | OK | ||
| test_RepulsiveDistancePairScore.py | 0.29 | OK | ||
| test_Scale.py | 0.28 | OK | ||
| test_Switching.py | 0.28 | OK | ||
| test_TBLReader.py | 0.29 | OK | ||
| test_MultivariateFNormalSufficient.cpp | 0.08 | OK | ||
| test_FretRestraint.py | 0.24 | OK | ||
| test_Weight.py | 0.33 | OK | ||
| test_mc_WeightMover.py | 0.29 | OK | ||
| MockGrid.py | 0.10 | OK | ||
| medium_test_standards.py | 0.74 | OK | ||
| medium_test_GaussianProcessInterpolationRestraintNumerically.py | 0.47 | OK | ||
| medium_test_GaussianProcessInterpolationRestraintNumericallyNoMean.py | 0.32 | OK | ||
| medium_test_GaussianProcessInterpolationRestraintNumericallyNoSigma.py | 0.42 | OK | ||
| test_crosslinkms.py | 0.93 | OK | ||
| test_LognormalAmbiguousRestraint.py | 0.26 | OK | ||
| test_ISDRestraint.py | 0.24 | OK | ||
| test_NormalSigmaPCRestraint.py | 0.26 | OK | ||
| test_PenalizedComplexityPrior.py | 0.27 | OK | ||
| test_uniform_prior.py | 0.28 | OK | ||
| test_log_wrapper.py | 0.28 | OK | ||
| test_monte_carlo.py | 0.28 | OK | ||
| test_moved_mc_crosslink_ms.py | 0.29 | OK | ||
| test_ambiguous_restraint.py | 0.28 | OK |
