| IMP.em |
Mac ARM |
[+] |
medium_test_local_fitting.py ======================================================================
FAIL: Tests.test_fast_vs_slow_local_fitting
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-21565/imp-20240426.develop.d4e9f3251e/modules/em/test/medium_test_local_fitting.py", line 65, in test_fast_vs_slow_local_fitting
self.assertAlmostEqual(fr_fast.get_score(0), fr_slow.get_score(0),
AssertionError: 0.02552446499975103 != 0.12901397304838536 within 0.1 delta (0.10348950804863433 difference)
|
3.91 | FAIL | NEWFAIL |
| IMP.em |
deb22 |
[+] |
medium_test_local_fitting.py ======================================================================
FAIL: Tests.test_fast_vs_slow_local_fitting
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-1/imp/modules/em/test/medium_test_local_fitting.py", line 65, in test_fast_vs_slow_local_fitting
self.assertAlmostEqual(fr_fast.get_score(0), fr_slow.get_score(0),
AssertionError: 0.008495453309733225 != 0.25869430874488897 within 0.1 delta (0.25019885543515574 difference)
|
2.46 | FAIL | NEWFAIL |
| IMP.em |
Mac 12 |
[+] |
medium_test_local_fitting.py ======================================================================
ERROR: Tests.test_fast_vs_slow_local_fitting
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-573/imp-20240426.develop.d4e9f3251e/modules/em/test/medium_test_local_fitting.py", line 64, in test_fast_vs_slow_local_fitting
print("fast:", fr_fast.get_score(0), " slow:", fr_slow.get_score(0))
^^^^^^^^^^^^^^^^^^^^
File "/private/tmp/nightly-build-573/build/lib/IMP/em/__init__.py", line 2173, in get_score
return _IMP_em.FittingSolutions_get_score(self, i)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
_IMP_kernel.UsageException: Usage check failure: The index requested (0) in get_transformation is out of range (0)
|
6.04 | FAIL | NEWFAIL |
| IMP.isd |
Fast |
[+] |
test_Covariance1DFunction.py ======================================================================
FAIL: Tests.testDerivOne
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-1/imp-20240426.develop.d4e9f3251e/modules/isd/test/test_Covariance1DFunction.py", line 245, in testDerivOne
delta=0.001)
AssertionError: 1.0076335877862594 != 1.0 within 0.001 delta
|
0.46 | FAIL | NEWFAIL |
| IMP.multifit |
Mac 10.10 |
[+] |
test_fit_fft.py ======================================================================
ERROR: Tests.test_fit_fft_run_parallel
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-420/imp-20240426.develop.d4e9f3251e/modules/multifit/test/test_fit_fft.py", line 39, in test_fit_fft_run_parallel
['-c', '2', self.get_input_file_name('twoblobs.asmb.input')])
File "/private/tmp/nightly-build-420/build/lib/IMP/test/__init__.py", line 792, in run_python_module
return module.main()
File "/private/tmp/nightly-build-420/build/lib/IMP/multifit/fit_fft.py", line 181, in main
run(args.assembly_file, args)
File "/private/tmp/nightly-build-420/build/lib/IMP/multifit/fit_fft.py", line 173, in run
ctx = _get_context()
File "/private/tmp/nightly-build-420/build/lib/IMP/multifit/fit_fft.py", line 29, in _get_context
if 'forkserver' in multiprocessing.get_all_start_methods():
AttributeError: 'module' object has no attribute 'get_all_start_methods'
|
2.17 | FAIL | |
| IMP.multifit |
RH7 RPM |
[+] |
test_fit_fft.py ======================================================================
ERROR: Tests.test_fit_fft_run_parallel
----------------------------------------------------------------------
Traceback (most recent call last):
File "/builddir/build/BUILD/imp-20240426.develop.d4e9f3251e/imp/modules/multifit/test/test_fit_fft.py", line 39, in test_fit_fft_run_parallel
['-c', '2', self.get_input_file_name('twoblobs.asmb.input')])
File "/builddir/build/BUILD/imp-20240426.develop.d4e9f3251e/build/lib/IMP/test/__init__.py", line 792, in run_python_module
return module.main()
File "/builddir/build/BUILD/imp-20240426.develop.d4e9f3251e/build/lib/IMP/multifit/fit_fft.py", line 181, in main
run(args.assembly_file, args)
File "/builddir/build/BUILD/imp-20240426.develop.d4e9f3251e/build/lib/IMP/multifit/fit_fft.py", line 173, in run
ctx = _get_context()
File "/builddir/build/BUILD/imp-20240426.develop.d4e9f3251e/build/lib/IMP/multifit/fit_fft.py", line 29, in _get_context
if 'forkserver' in multiprocessing.get_all_start_methods():
AttributeError: 'module' object has no attribute 'get_all_start_methods'
|
1.38 | FAIL | |
| IMP.nestor |
Mac 12 |
[+] |
medium_test_standards.py Traceback (most recent call last):
File "/tmp/nightly-build-573/build/test/nestor/medium_test_standards.py", line 6, in <module>
import IMP.nestor
File "/private/tmp/nightly-build-573/build/lib/IMP/nestor/__init__.py", line 6, in <module>
import yaml
ModuleNotFoundError: No module named 'yaml'
|
0.30 | FAIL | |
| IMP.nestor examples |
Mac ARM |
[+] |
nude_modeling.py [Bens-Mac.local:30129] shmem: mmap: an error occurred while determining whether or not /tmp/nightly-build-21565/ompi.Bens-Mac.11808/jf.0/2856517632/sm_segment.Bens-Mac.11808.aa430000.0 could be created.
Traceback (most recent call last):
File "/tmp/nightly-build-21565/imp-20240426.develop.d4e9f3251e/modules/nestor/examples/nude_modeling.py", line 36, in <module>
h_param_file = sys.argv[3]
~~~~~~~~^^^
IndexError: list index out of range
|
0.65 | FAIL | |
| IMP.nestor examples |
Release |
[+] |
nude_modeling.py [1714116593.634541] [54a1e0f06b1c:11517:0] sock.c:503 UCX WARN unable to read somaxconn value from /proc/sys/net/core/somaxconn file
Traceback (most recent call last):
File "/tmp/nightly-build-1/imp-20240426.develop.d4e9f3251e/modules/nestor/examples/nude_modeling.py", line 36, in <module>
h_param_file = sys.argv[3]
IndexError: list index out of range
|
2.49 | FAIL | |
| IMP.nestor examples |
Debug |
[+] |
nude_modeling.py [1714117481.601634] [e8317d4f8eee:11502:0] sock.c:503 UCX WARN unable to read somaxconn value from /proc/sys/net/core/somaxconn file
Traceback (most recent call last):
File "/tmp/nightly-build-1/imp-20240426.develop.d4e9f3251e/modules/nestor/examples/nude_modeling.py", line 36, in <module>
h_param_file = sys.argv[3]
IndexError: list index out of range
|
2.67 | FAIL | |
| IMP.nestor examples |
Fast |
[+] |
nude_modeling.py [1714116794.755720] [fc0e41fee5fe:11906:0] sock.c:503 UCX WARN unable to read somaxconn value from /proc/sys/net/core/somaxconn file
Traceback (most recent call last):
File "/tmp/nightly-build-1/imp-20240426.develop.d4e9f3251e/modules/nestor/examples/nude_modeling.py", line 36, in <module>
h_param_file = sys.argv[3]
IndexError: list index out of range
|
3.26 | FAIL | |
| IMP.nestor examples |
Mac Fast |
[+] |
nude_modeling.py [Bens-Mac.local:47992] shmem: mmap: an error occurred while determining whether or not /tmp/nightly-build-41360/ompi.Bens-Mac.11808/jf.0/623116288/sm_segment.Bens-Mac.11808.25240000.0 could be created.
Traceback (most recent call last):
File "/tmp/nightly-build-41360/imp-20240426.develop.d4e9f3251e/modules/nestor/examples/nude_modeling.py", line 36, in <module>
h_param_file = sys.argv[3]
~~~~~~~~^^^
IndexError: list index out of range
|
1.41 | FAIL | |
| IMP.nestor examples |
Coverage |
[+] |
nude_modeling.py Traceback (most recent call last):
File "/tmp/nightly-build-1/imp-20240426.develop.d4e9f3251e/modules/nestor/examples/nude_modeling.py", line 36, in <module>
h_param_file = sys.argv[3]
~~~~~~~~^^^
IndexError: list index out of range
|
4.52 | FAIL | |
| IMP.nestor examples |
Mac 12 |
[+] |
nude_modeling.py Traceback (most recent call last):
File "/tmp/nightly-build-573/imp-20240426.develop.d4e9f3251e/modules/nestor/examples/nude_modeling.py", line 24, in <module>
from IMP.nestor import NestedSampling
File "/private/tmp/nightly-build-573/build/lib/IMP/nestor/__init__.py", line 6, in <module>
import yaml
ModuleNotFoundError: No module named 'yaml'
|
2.47 | FAIL | |
| IMP.npctransport |
CUDA |
[+] |
test_harmonic_spring_score.py |
4.75 | FAIL | |
| IMP.npctransport |
Fast |
[+] |
expensive_test_harmonic_spring_score_from_protobuf.py ======================================================================
FAIL: Tests.test_harmonic_spring_score_from_protobuf_two_beads
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-1/imp-20240426.develop.d4e9f3251e/modules/npctransport/test/expensive_test_harmonic_spring_score_from_protobuf.py", line 209, in test_harmonic_spring_score_from_protobuf_two_beads
self._test_harmonic_spring_score_from_protobuf(2)
File "/tmp/nightly-build-1/imp-20240426.develop.d4e9f3251e/modules/npctransport/test/expensive_test_harmonic_spring_score_from_protobuf.py", line 193, in _test_harmonic_spring_score_from_protobuf
self._analyze_run(assign_file, R)
File "/tmp/nightly-build-1/imp-20240426.develop.d4e9f3251e/modules/npctransport/test/expensive_test_harmonic_spring_score_from_protobuf.py", line 138, in _analyze_run
delta=0.07)
AssertionError: 0.1524259505978317 != 0.006737946999085467 within 0.07 delta
|
17.99 | FAIL | NEWFAIL |
| IMP.pmi |
Mac Fast |
[+] |
expensive_test_replica_exchange.py ======================================================================
FAIL: Tests.test_macro_rmf_stat
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-41360/imp-20240426.develop.d4e9f3251e/modules/pmi/test/expensive_test_replica_exchange.py", line 257, in test_macro_rmf_stat
self.assertAlmostEqual(avscore, t/2, delta=0.1)
AssertionError: 0.38656685184121836 != 0.5 within 0.1 delta (0.11343314815878164 difference)
|
3.58 | FAIL | |
| IMP.pmi1 |
Fast |
[+] |
expensive_test_replica_exchange.py ======================================================================
FAIL: Tests.test_macro_rmf_stat
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-1/imp-20240426.develop.d4e9f3251e/modules/pmi1/test/expensive_test_replica_exchange.py", line 260, in test_macro_rmf_stat
self.assertAlmostEqual(avscore, t/2, delta=0.1)
AssertionError: 0.6660417460661603 != 0.5 within 0.1 delta
|
4.09 | FAIL | |
| IMP.sampcon |
CUDA |
[+] |
medium_test_plot_score.py |
3.00 | FAIL | |
| IMP.spatiotemporal |
CUDA |
[+] |
test_make_graph.py |
3.02 | FAIL | |
| IMP.spatiotemporal examples |
CUDA |
[+] |
Simple_spatiotemporal_example.py |
3.02 | FAIL | |
| RMF |
Coverage |
[+] |
test_errors.py .E
======================================================================
ERROR: test_open_2x (__main__.GenericTest.test_open_2x)
Test that opening a file 2x works
----------------------------------------------------------------------
Traceback (most recent call last):
File "/tmp/nightly-build-1/imp-20240426.develop.d4e9f3251e/modules/rmf/dependency/RMF/test/test_errors.py", line 17, in test_open_2x
f0 = RMF.HDF5.open_file(
^^^^^^^^^^^^^^^^^^^
File "/tmp/nightly-build-1/build/lib/RMF_HDF5.py", line 6138, in open_file
return _RMF_HDF5.open_file(name)
^^^^^^^^^^^^^^^^^^^^^^^^^
OSError: "Invalid handle returned from H5Fopen(name.c_str(), H5F_ACC_RDWR, plist)"
----------------------------------------------------------------------
Ran 2 tests in 0.016s
FAILED (errors=1)
|
0.41 | FAIL | |
