All test failures for build on 2024-05-10, develop 78018a392b

Component Platform [+] Name Runtime (s) State Delta
IMP.em deb20 [+] medium_test_local_fitting.py 
======================================================================
ERROR: Tests.test_fast_vs_slow_local_fitting
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/tmp/nightly-build-1/imp/modules/em/test/medium_test_local_fitting.py", line 64, in test_fast_vs_slow_local_fitting
    print("fast:", fr_fast.get_score(0), " slow:", fr_slow.get_score(0))
  File "/tmp/nightly-build-1/imp/build/lib/IMP/em/__init__.py", line 2199, in get_score
    return _IMP_em.FittingSolutions_get_score(self, i)
_IMP_kernel.UsageException: Usage check failure: The index requested (0) in get_transformation is out of range (0)
1.03 FAIL NEWFAIL
IMP.multifit Mac 10.10 [+] test_fit_fft.py 
======================================================================
ERROR: Tests.test_fit_fft_run_parallel
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/tmp/nightly-build-420/imp-20240510.develop.78018a392b/modules/multifit/test/test_fit_fft.py", line 39, in test_fit_fft_run_parallel
    ['-c', '2', self.get_input_file_name('twoblobs.asmb.input')])
  File "/private/tmp/nightly-build-420/build/lib/IMP/test/__init__.py", line 792, in run_python_module
    return module.main()
  File "/private/tmp/nightly-build-420/build/lib/IMP/multifit/fit_fft.py", line 181, in main
    run(args.assembly_file, args)
  File "/private/tmp/nightly-build-420/build/lib/IMP/multifit/fit_fft.py", line 173, in run
    ctx = _get_context()
  File "/private/tmp/nightly-build-420/build/lib/IMP/multifit/fit_fft.py", line 29, in _get_context
    if 'forkserver' in multiprocessing.get_all_start_methods():
AttributeError: 'module' object has no attribute 'get_all_start_methods'
2.16 FAIL
IMP.multifit RH7 RPM [+] test_fit_fft.py 
======================================================================
ERROR: Tests.test_fit_fft_run_parallel
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/imp-20240510.develop.78018a392b/imp/modules/multifit/test/test_fit_fft.py", line 39, in test_fit_fft_run_parallel
    ['-c', '2', self.get_input_file_name('twoblobs.asmb.input')])
  File "/builddir/build/BUILD/imp-20240510.develop.78018a392b/build/lib/IMP/test/__init__.py", line 792, in run_python_module
    return module.main()
  File "/builddir/build/BUILD/imp-20240510.develop.78018a392b/build/lib/IMP/multifit/fit_fft.py", line 181, in main
    run(args.assembly_file, args)
  File "/builddir/build/BUILD/imp-20240510.develop.78018a392b/build/lib/IMP/multifit/fit_fft.py", line 173, in run
    ctx = _get_context()
  File "/builddir/build/BUILD/imp-20240510.develop.78018a392b/build/lib/IMP/multifit/fit_fft.py", line 29, in _get_context
    if 'forkserver' in multiprocessing.get_all_start_methods():
AttributeError: 'module' object has no attribute 'get_all_start_methods'
0.91 FAIL
IMP.nestor examples Mac ARM [+] nude_modeling.py 
[Bens-Mac.local:69415] shmem: mmap: an error occurred while determining whether or not /tmp/nightly-build-60898/ompi.Bens-Mac.11808/jf.0/2450063360/sm_segment.Bens-Mac.11808.92090000.0 could be created.
Traceback (most recent call last):
  File "/tmp/nightly-build-60898/imp-20240510.develop.78018a392b/modules/nestor/examples/nude_modeling.py", line 36, in <module>
    h_param_file = sys.argv[3]
                   ~~~~~~~~^^^
IndexError: list index out of range
0.65 FAIL
IMP.nestor examples Release [+] nude_modeling.py 
[1715326472.049257] [11124347372a:11509:0]            sock.c:503  UCX  WARN  unable to read somaxconn value from /proc/sys/net/core/somaxconn file
Traceback (most recent call last):
  File "/tmp/nightly-build-1/imp-20240510.develop.78018a392b/modules/nestor/examples/nude_modeling.py", line 36, in <module>
    h_param_file = sys.argv[3]
IndexError: list index out of range
2.81 FAIL
IMP.nestor examples Debug [+] nude_modeling.py 
[1715327462.155318] [b9f12e70d9c5:11499:0]            sock.c:503  UCX  WARN  unable to read somaxconn value from /proc/sys/net/core/somaxconn file
Traceback (most recent call last):
  File "/tmp/nightly-build-1/imp-20240510.develop.78018a392b/modules/nestor/examples/nude_modeling.py", line 36, in <module>
    h_param_file = sys.argv[3]
IndexError: list index out of range
2.79 FAIL
IMP.nestor examples Fast [+] nude_modeling.py 
[1715326718.793446] [ead98838b056:11922:0]            sock.c:503  UCX  WARN  unable to read somaxconn value from /proc/sys/net/core/somaxconn file
Traceback (most recent call last):
  File "/tmp/nightly-build-1/imp-20240510.develop.78018a392b/modules/nestor/examples/nude_modeling.py", line 36, in <module>
    h_param_file = sys.argv[3]
IndexError: list index out of range
3.09 FAIL
IMP.nestor examples Mac Fast [+] nude_modeling.py 
[Bens-Mac.local:08062] shmem: mmap: an error occurred while determining whether or not /tmp/nightly-build-1486/ompi.Bens-Mac.11808/jf.0/3853844480/sm_segment.Bens-Mac.11808.e5b50000.0 could be created.
Traceback (most recent call last):
  File "/tmp/nightly-build-1486/imp-20240510.develop.78018a392b/modules/nestor/examples/nude_modeling.py", line 36, in <module>
    h_param_file = sys.argv[3]
                   ~~~~~~~~^^^
IndexError: list index out of range
1.18 FAIL
IMP.nestor examples Coverage [+] nude_modeling.py 
Traceback (most recent call last):
  File "/tmp/nightly-build-1/imp-20240510.develop.78018a392b/modules/nestor/examples/nude_modeling.py", line 36, in <module>
    h_param_file = sys.argv[3]
                   ~~~~~~~~^^^
IndexError: list index out of range
3.80 FAIL
IMP.nestor examples Mac 12 [+] nude_modeling.py 
[Vagrants-Mac-2.local:08817] shmem: mmap: an error occurred while determining whether or not /tmp/nightly-build-574/ompi.Vagrants-Mac-2.11808/jf.0/1791426560/sm_segment.Vagrants-Mac-2.11808.6ac70000.0 could be created.
Traceback (most recent call last):
  File "/tmp/nightly-build-574/imp-20240510.develop.78018a392b/modules/nestor/examples/nude_modeling.py", line 36, in <module>
    h_param_file = sys.argv[3]
                   ~~~~~~~~^^^
IndexError: list index out of range
2.74 FAIL
IMP.npctransport CUDA [+] test_harmonic_spring_score.py 
free(): invalid pointer
4.70 FAIL
IMP.npctransport F40 RPM [+] medium_test_slab_with_cylindrical_pore_ss.py 
======================================================================
FAIL: CylindricalPoreSSTest.test_slab_pair_score
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/imp-20240510.develop.78018a392b/imp/modules/npctransport/test/medium_test_slab_with_cylindrical_pore_ss.py", line 129, in test_slab_pair_score
    self._test_optimization('tmp.pym')
  File "/builddir/build/BUILD/imp-20240510.develop.78018a392b/imp/modules/npctransport/test/medium_test_slab_with_cylindrical_pore_ss.py", line 79, in _test_optimization
    self.assertTrue(OUT_SLAB)
AssertionError: False is not true
1.46 FAIL NEWFAIL
IMP.npctransport Win64 [+] medium_test_slab_with_cylindrical_pore_ss.py 
======================================================================
FAIL: CylindricalPoreSSTest.test_slab_pair_score
----------------------------------------------------------------------
Traceback (most recent call last):
  File "Z:\tmp\nightly-build-1\imp-20240510.develop.78018a392b\modules\npctransport\test\medium_test_slab_with_cylindrical_pore_ss.py", line 129, in test_slab_pair_score
    self._test_optimization('tmp.pym')
  File "Z:\tmp\nightly-build-1\imp-20240510.develop.78018a392b\modules\npctransport\test\medium_test_slab_with_cylindrical_pore_ss.py", line 79, in _test_optimization
    self.assertTrue(OUT_SLAB)
AssertionError: False is not true
3.71 FAIL NEWFAIL
IMP.pmi1 Fast [+] expensive_test_replica_exchange.py 
======================================================================
FAIL: Tests.test_macro
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/tmp/nightly-build-1/imp-20240510.develop.78018a392b/modules/pmi1/test/expensive_test_replica_exchange.py", line 122, in test_macro
    self.assertAlmostEqual(avscore, t/2, delta=0.1)
AssertionError: 0.3694694654994487 != 0.5 within 0.1 delta
4.23 FAIL NEWFAIL
IMP.pmi1 Mac Fast [+] expensive_test_replica_exchange.py 
======================================================================
FAIL: Tests.test_macro_rmf_stat
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/tmp/nightly-build-1486/imp-20240510.develop.78018a392b/modules/pmi1/test/expensive_test_replica_exchange.py", line 260, in test_macro_rmf_stat
    self.assertAlmostEqual(avscore, t/2, delta=0.1)
AssertionError: 0.6412051486270637 != 0.5 within 0.1 delta (0.14120514862706368 difference)
2.55 FAIL NEWFAIL
IMP.sampcon CUDA [+] medium_test_plot_score.py 
free(): invalid pointer
3.04 FAIL
IMP.spatiotemporal CUDA [+] test_make_graph.py 
free(): invalid pointer
5.44 FAIL
IMP.spatiotemporal examples CUDA [+] Simple_spatiotemporal_example.py 
free(): invalid pointer
3.03 FAIL
RMF Coverage [+] test_errors.py 
.E
======================================================================
ERROR: test_open_2x (__main__.GenericTest.test_open_2x)
Test that opening a file 2x works
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/tmp/nightly-build-1/imp-20240510.develop.78018a392b/modules/rmf/dependency/RMF/test/test_errors.py", line 17, in test_open_2x
    f0 = RMF.HDF5.open_file(
         ^^^^^^^^^^^^^^^^^^^
  File "/tmp/nightly-build-1/build/lib/RMF_HDF5.py", line 6138, in open_file
    return _RMF_HDF5.open_file(name)
           ^^^^^^^^^^^^^^^^^^^^^^^^^
OSError:  "Invalid handle returned from H5Fopen(name.c_str(), H5F_ACC_RDWR, plist)"

----------------------------------------------------------------------
Ran 2 tests in 0.016s

FAILED (errors=1)
0.41 FAIL