> > The structures 1frpA and 1fbpA are the same, and they contain hetero
> > atoms. I haven't been able to use the hetero atoms as restraints
> > and transfer them to the homology model using BLK or "." Can I do this
> > with a slight modification to this script?
>
> Yes, change the alignment as described in the manual (FAQ)
Well, the problem is that I don't really understand how to do this
from what the manual says.
Christian