MODELLER 6v2, 17 Feb 2002

     PROTEIN STRUCTURE MODELLING BY SATISFACTION OF SPATIAL RESTRAINTS

                                                                 
                     Copyright(c) 1989-2002 Andrej Sali          
                            All Rights Reserved                  
                                                                 
                            Written by A. Sali                   
          with help from A. Fiser, R. Sanchez, M.A. Marti-Renom, 
                   B. Jerkovic, A. Badretdinov, F. Melo,         
                       J.P. Overington & E. Feyfant              
                   Rockefeller University, New York, USA         
                     Harvard University, Cambridge, USA          
                 Imperial Cancer Research Fund, London, UK       
             Birkbeck College, University of London, London, UK  


Kind, OS, HostName, Kernel, Processor: 4, IRIX64 origin 6.5 IP35
Date and time of compilation         : 07/05/2002 17:12:26
Job starting time (YY/MM/DD HH:MM:SS): 2002/07/08  11:15:21.261

iatmcls_286W> MODEL atom not classified:  ####:N  ####
mkapsa__293W> No TOPOLOGY_LIB is in memory. Use READ_TOPOLOGY to read one.
iup2crm_280W> No TOPOLOGY_LIB in memory or assigning a BLK residue.
              Default CHARMM atom type assigned:  N -->  N
              This message is written only for the first such atom.
fndatmi_285W> Number of residues <> number of atoms; atom code:       17       16  CA
fndatmi_285W> Number of residues <> number of atoms; atom code:       17       16  CA

Pairwise dynamic programming alignment (ALIGN2D):
  Residue-residue metric   : ${MODINSTALL6v2}/modlib//as1.sim.mat
  Diagonal                 :          100
  Overhang                 :            0
  Maximal gap length       :       999999
  Local alignment          :            F
  MATRIX_OFFSET (local aln):       0.0000
  FIX_OFFSETS              :      0.0  1000.0  2000.0  3000.0  4000.0
  N_SUBOPT                 :            1
  SUBOPT_OFFSET            :       2.0000
  Alignment block          :            1
  Gap introduction penalty :    -900.0000
  Gap extension penalty    :     -50.0000
  Gap diagonal penalty     :       0.0000
  Structure gap penalties  :    0.350   1.200   0.900   1.200   0.600   8.600   1.200
  Length of alignment      :           17
  Score                    :   11718.0000

Dynamically allocated memory at          finish [B,kB,MB]:      3016257    2945.563     2.877
Starting time                                            : 2002/07/08  11:15:21.261
Closing time                                             : 2002/07/08  11:15:23.850
Total CPU time [seconds]                                 :       0.00