MODELLER 9v6, 2009/01/30, r6593

     PROTEIN STRUCTURE MODELLING BY SATISFACTION OF SPATIAL RESTRAINTS


                     Copyright(c) 1989-2009 Andrej Sali
                            All Rights Reserved

                             Written by A. Sali
                               with help from
           B. Webb, M.S. Madhusudhan, M-Y. Shen, M.A. Marti-Renom,
                N. Eswar, F. Alber, M. Topf, B. Oliva, A. Fiser,
                    R. Sanchez, B. Yerkovich, A. Badretdinov,
                      F. Melo, J.P. Overington, E. Feyfant
                 University of California, San Francisco, USA
                    Rockefeller University, New York, USA
                      Harvard University, Cambridge, USA
                   Imperial Cancer Research Fund, London, UK
              Birkbeck College, University of London, London, UK


Kind, OS, HostName, Kernel, Processor: 4, WinXP build 2600 Service Pack 2, LIBRA, uni, x86 Family 15 Model 4 Stepping 9

Date and time of compilation         : 2009/01/30 22:52:32
MODELLER executable type             : i386-w32
Job starting time (YY/MM/DD HH:MM:SS): 2009/04/24 22:00:42

openf___224_> Open           $(LIB)/restyp.lib
openf___224_> Open           ${MODINSTALL9v6}/modlib/resgrp.lib
rdresgr_266_> Number of residue groups:        2
openf___224_> Open           ${MODINSTALL9v6}/modlib/sstruc.lib

Dynamically allocated memory at   amaxlibraries [B,KiB,MiB]:      3234072    3158.273     3.084

Dynamically allocated memory at   amaxlibraries [B,KiB,MiB]:      3234600    3158.789     3.085
openf___224_> Open           ${MODINSTALL9v6}/modlib/resdih.lib

Dynamically allocated memory at   amaxlibraries [B,KiB,MiB]:      3283200    3206.250     3.131
rdrdih__263_> Number of dihedral angle types         :        9
              Maximal number of dihedral angle optima:        3
              Dihedral angle names                   :  Alph Phi Psi Omeg chi1 chi2 chi3 chi4 chi5
openf___224_> Open           ${MODINSTALL9v6}/modlib/radii.lib

Dynamically allocated memory at   amaxlibraries [B,KiB,MiB]:      3292440    3215.273     3.140
openf___224_> Open           ${MODINSTALL9v6}/modlib/radii14.lib
openf___224_> Open           ${MODINSTALL9v6}/modlib/af_mnchdef.lib
rdwilmo_274_> Mainchain residue conformation classes:  APBLE
openf___224_> Open           ${MODINSTALL9v6}/modlib/mnch.lib
rdclass_257_> Number of classes:        5
openf___224_> Open           ${MODINSTALL9v6}/modlib/mnch1.lib
openf___224_> Open           ${MODINSTALL9v6}/modlib/mnch2.lib
openf___224_> Open           ${MODINSTALL9v6}/modlib/mnch3.lib
openf___224_> Open           ${MODINSTALL9v6}/modlib/xs4.mat
rdrrwgh_268_> Number of residue types:       21
openf___224_> Open           alignment.seg
openf___224_> Open           .\2AZW.pdb

Dynamically allocated memory at   amaxalignment [B,KiB,MiB]:      3307671    3230.147     3.154
openf___224_> Open           .\1XWH.pdb
openf___224_> Open           .\1H5P.pdb
openf___224_> Open           .\1M9D.pdb

Read the alignment from file       : alignment.seg
Total number of alignment positions:     0

  #  Code        #_Res #_Segm PDB_code    Name
-------------------------------------------------------------------------------
  1       2AZW       0      0        2AZW
  2       1XWH       0      0        1XWH
  3       1H5P       0      0        1H5P
  4       1M9D       0      0        1M9D
malign__587E> This command needs a non-empty alignment.
              Run alignment.append() or make alignment first.