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Re: [modeller_usage] docking and modeling peptid.

On 02/03/2010 06:08 AM, Knut J Bjuland wrote:

Can the latest version of modeller do docking of a peptide into an
active site. In case modeler can not do this kind of docking, which
particular program is best suited for doing peptid protein docking.
No, Modeller is a tool for comparative modeling - it does not do any kind of docking. For that, you could try PatchDock, AutoDock or UCSF DOCK. 

	Ben Webb, Modeller Caretaker
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             http://www.salilab.org/modeller/
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