On 5/11/10 3:51 AM, Marie-Josée Porcheron wrote:
How to build the DOPE profile for mutliple templates modelling? (in the advanced tutorial, a TvLDH-mult_dope.dat file is present, but not the info on how to obtain it ^^).
DOPE assesses a protein structure - it doesn't care how you built that structure. So you can assess a single-template structure, a multiple-template structure, or even a PDB file made by some other program. Just use the same script from the basic tutorial to generate the profile.
Ben Webb, Modeller Caretaker -- modeller-care@salilab.org http://www.salilab.org/modeller/ Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage