[modeller_usage] how to obtain the results from assess_methods from automodel() object

[Thomas Evangelidis <>]

Dear Modeller Caretaker,


I use assess_methods=(assess.DOPEHR,assess.normalized_dope) within the automodel constructor to evaluate thousands of models during structure prediction. As you see it becomes very difficult to trace these values within the log files, and assign the scores to the correct files and alignments. Is there any easier way to obtain these values from the instance of automodel(), i.e.

...
a = MyModel(env, alnfile=alignment,
                      knowns=known_templates, assess_methods=(assess.DOPEHR, assess.normalized_dope),
                      sequence='target')
....
a.make()

dopehr_score = a.get_dopehr(modelNo) ## something like this


thanks in advance,
Thomas