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Re: [modeller_usage] loop modelling in Chimera

On 8/5/15 9:46 AM, Mitul Saha wrote:

I am modelling a loop region.
I used Chimera, which uses the web version of your modloop.
But i notice in the results, that the results are not restricting
proline phi to around -60 degrees.
Modeller does restrain dihedrals to match known distributions. Most likely in your case it was not able to find otherwise good-scoring loop conformations that didn't violate these dihedral restraints. 

	Ben Webb, Modeller Caretaker
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