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Hello!
I'm trying to model a certain membrane protein. There are two template structures with decent sequence similariry (~ 40 %) and not-so-great resolution (~ 3 angstrom).
When building a model against either template nothing in particular sticks out in the logfile, but when building a model model against both templates combined there are lots of distance violations (CA-CA and N-O) in the log, however this model gives the lowest DOPE score.
What gives?
Thomas
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