June 2015 - IMP-dev - salilab.org

PMI commits mailing list
by Ben Webb 18 Jun '15

18 Jun '15

For those of you that follow PMI development, just FYI: there is a PMI-commits mailing list. Similar to the IMP-commits list, it gets an email every time code is pushed to the PMI repository at GitHub. (Full disclosure: it's actually been in existence for some time, but it never worked correctly - it should now.) To (un)subscribe, see https://salilab.org/mailman/listinfo/pmi-commits Ben -- ben(a)salilab.org http://salilab.org/~ben/ "It is a capital mistake to theorize before one has data." - Sir Arthur Conan Doyle

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Preparation for 2.5.0 release
by Ben Webb 18 Jun '15

18 Jun '15

Since things look pretty stable right now, and there have been a bunch of changes since the last release, I'll branch for an IMP 2.5.0 release in the near future. Yell if you need me to wait on something. Ben -- ben(a)salilab.org http://salilab.org/~ben/ "It is a capital mistake to theorize before one has data." - Sir Arthur Conan Doyle

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Re: [IMP-dev] [IMP-commits] [salilab/imp] 513c33: Add a support to write C-alpha residues and coarse...
by Seung Joong Kim 08 Jun '15

08 Jun '15

Can you upgrade "rmf_pdb" to get BEAD coordinates of the rmf file, as similar to what I did below? Of course, what I have done is not perfect - it is very preliminary without chain ID etc.. But at least generating some coordinates is much better than nothing saved. - SJ On 6/3/2015 4:26 PM, Notification of IMP commits wrote: > Branch: refs/heads/develop > Home: https://github.com/salilab/imp > Commit: 513c339597feef49bb0b532c21ca125f498e0d8c > https://github.com/salilab/imp/commit/513c339597feef49bb0b532c21ca125f498e0… > Author: procyon777(a)gmail.com <procyon777(a)gmail.com> > Date: 2015-06-03 (Wed, 03 Jun 2015) > > Changed paths: > M modules/atom/src/internal/pdb.cpp > > Log Message: > ----------- > Add a support to write C-alpha residues and coarsed-grained BEADs into a pdb file > > > > > _______________________________________________ > IMP-commits mailing list > https://salilab.org/mailman/listinfo/imp-commits -- Seung Joong Kim, Ph.D. Postdoctoral Scholar, Andrej Sali group Department of Bioengineering and Therapeutic Sciences University of California at San Francisco (UCSF) 1-217-649-2147 http://salilab.org/~sjkim

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