1) Can you write a benchmark?
2) I once wrote a benchmark for pmi modules/pmi/benchmark/benchmark_loop_reconstruction.py
That was pmi commit 6f81fe5d469269c90840a9aa09895f33388ac66a, 5 Feb 2014, around f59e9f92d8c196f70b72f46ddb864c0c9c73628a IMP commit, therefore after 2.0.1, which was May 2013.
Today I still get the same times. Maybe is useless, but can you try to run it with the latest IMP develop commit?
On Fri, Feb 6, 2015 at 4:02 PM, Davide Baù davide.bau@gmail.com wrote:
> Hi, > > we are experiencing some performance differences between different > versions of IMP. > > IMP 2.0.1 seems to be much faster (up to 6 times faster) as compared to > versions 2.1, 2.2 and 2.3.1 (compiled with the "Release" flag). Can you > confirm this behavior or is it an issue affecting only our machines (both > Mac and Linux)? > > Thanks, > Davide > > _______________________________________________ > IMP-dev mailing list > IMP-dev@salilab.org > https://salilab.org/mailman/listinfo/imp-dev > >