yes, check it with test_element.py in atom/tests
On Fri, Aug 7, 2009 at 11:56 AM, Keren Laskerkerenl@salilab.org wrote: > so - in the end: > did you change write_pdb to support creating on Atoms using the create > function ? > it still does not work for me ..... :) > On Aug 7, 2009, at 11:49 AM, Dina Schneidman wrote: > >> yes, that's of course the ultimate solution. >> I wanted to do that, however changed my mind when I saw the size of >> this dictionary. >> It seems not reasonable to load it for each PDB parsing. >> However I do think it will be nice to have it as optional. >> >> On Fri, Aug 7, 2009 at 11:47 AM, Ben Webbben@salilab.org wrote: >>> >>> On 08/07/2009 11:42 AM, Dina Schneidman wrote: >>>> >>>> Do you mean to his dictionary of chemical components? >>>> www.wwpdb.org/ccd.html >>> >>> Yes, that looks about right. Their Ligand Expo tool will even give you >>> pretty pictures of a given residue. >>> >>> Ben >>> -- >>> ben@salilab.org http://salilab.org/~ben/ >>> "It is a capital mistake to theorize before one has data." >>> - Sir Arthur Conan Doyle >>> _______________________________________________ >>> IMP-dev mailing list >>> IMP-dev@salilab.org >>> https://salilab.org/mailman/listinfo/imp-dev >>> >> _______________________________________________ >> IMP-dev mailing list >> IMP-dev@salilab.org >> https://salilab.org/mailman/listinfo/imp-dev > > _______________________________________________ > IMP-dev mailing list > IMP-dev@salilab.org > https://salilab.org/mailman/listinfo/imp-dev >