18 Jun
2012
18 Jun
'12
10:30 a.m.
On 06/18/2012 05:31 AM, Yannick Spill wrote: > In the light of my recent discovery of the statistics module in imp, I > was wondering if some of you would be interested in an implementation of > self-organizing maps (SOM). They are a generalization of principal > components analysis to nonlinear models. > http://en.wikipedia.org/wiki/Self-organizing_map > There's a shortcut for us to have it in IMP. It's called GPLVM, and is a > probabilistic SOM based on gaussian processes. Is that something that > would interest anyone?
If you're talking about GP-LVM from http://www.cs.man.ac.uk/~neill/gplvmcpp/ then we can't include that in IMP, unfortunately, because it is not open source software.
Ben
--
ben@salilab.org http://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
- Sir Arthur Conan Doyle