On Mon, May 18, 2009 at 2:51 PM, Ben Webb
<ben@salilab.org> wrote:
Daniel Russel wrote:
> Since I think such a new module is a good idea, I'll make it more
> concrete. Let's have a new module called IMP.helper. Its primary purpose
> is to contain functions that perform common tasks that
> - involve creation of more than one restraint or score state
> - creation of a restraint or score state followed by non-trivial
> manipulation of it
> - functions to create standard particle sets
>
> Examples would include existing code such as:
> - creating a rigid body and associated score states
> - restraining the diameter of a set of particles
> - creating a hard sphere excluded volume restraint which intelligently
> handles rigid bodies
> - creating a coarse grained model of a protein with known number of
> amino acids, but no known structure
>
> Having it in a module means that there is a clear first place to look
> for such things. The low level functionality in core is clearly
> differentiated from functions that use it.
I completely agree that a separate module is the best place for such
functionality. I'm just not sure I like the name. ;) Can't think of a
better one though...