hey -
so reading a pdb file with multiple chains, IMP changes the residues indexes to have sequential residue indexes. so imagine 3 chains A from 1 to 10, B from 1 to 10 and C from 1 to 10 reading into IMP we get: A from 1 to 10 B from 11 to 20 C from 21 to 30
this really messes up stuff ....
is there a special reason for that ?
thanks, Keren.
I can't reproduce it. I read the attached file and get the attached result for the resulting PDB which has all the residue indexes right. Can you provide an example pdb?
On Oct 21, 2009, at 1:59 AM, Keren Lasker wrote:
> hey - > > so reading a pdb file with multiple chains, IMP changes the residues > indexes to have sequential residue indexes. > so imagine 3 chains A from 1 to 10, B from 1 to 10 and C from 1 to 10 > reading into IMP we get: > A from 1 to 10 > B from 11 to 20 > C from 21 to 30 > > this really messes up stuff .... > > is there a special reason for that ? > > thanks, > Keren. > > > _______________________________________________ > IMP-dev mailing list > IMP-dev@salilab.org > https://salilab.org/mailman/listinfo/imp-dev
participants (2)
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Daniel Russel
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Keren Lasker