RNPII - Thursday 3pm, as originally scheduled :) On Oct 25, 2010, at 4:48 PM, Daniel Russel wrote:

> Recent changes: > • IMP::atom::Selection was added to allow specification of parts of > IMP::atom::Hierarchy using biological sorts of names. A few > functions to create restraints from them were added too. > • a new example was added in the kernel to show IMP used on a > biological system > • IMP::display::PymolWriter now supports adding labels to things > • IMP::display::PairRestraintGeometry and > IMP::display::ConnectivityRestraintGeometry were added to aid in > visualizing those restraints. > • IMP::bullet was added with an optimizer to use hard body physics > to resolve local collisions. > • IMP::atom::setup_as_rigid_body() has been deprecated and replaced > by IMP::atom::create_rigid_body(). The latter creates the rigid body > as a separtate particle so that the molecular hierarchy doesn't have > to worry about having its bounding sphere large enough to enclose > all the members. > • IMP::core::KClosePairsPairScore was added to have count based > cutoffs for close pair scoring. > • IMP::algebra::get_surface_area_and_volume() was added to compute > the two numbers for a set of balls > • Two examples were added to the kernel, Nup84 CG and Nup84 RB > which illustrate the usage of many aspects of IMP. > > As a reminder, Keren is discussing the RNAPII example tomorrow at 1. > _______________________________________________ > IMP-dev mailing list > IMP-dev@salilab.org > https://salilab.org/mailman/listinfo/imp-dev