On 11/18/20 9:17 AM, Gorbea, Jose wrote: > I am trying to run imp_sampcon exhaust from the actin tutorial and > pyRMSD is required. I tried pip installation and git cloned the > repository
Which one? "pip install" certainly won't work because the original author of pyRMSD gave up years ago and never added support for Python 3: https://github.com/victor-gil-sepulveda/pyRMSD/issues/12
If you want to git clone, you can use our fork of pyRMSD which *does* include Python 3 support (https://github.com/salilab/pyRMSD) then build with "python3 setup.py".
Ben