On 9/24/21 8:37 AM, Andrea Graziadei wrote:
> I have seen in some manuscripts (e.g. the cop9 signalosome paper by
> Gutierrez et al. https://www.pnas.org/content/117/8/4088 ) the
> analysis of average contact maps from clusters coming out of
> imp-sampcon or similar analysis of PMI modeling runs. In that
> manuscript for example it's in Fig. S7, panel G. I was wondering if
> you could tell me what is the tool used for this type of analysis, and
> whether it works on pdb or rmf files?

The authors of that paper (cc'd here) will know for sure, but all the
scripts they used should be in the GitHub repository at
https://github.com/integrativemodeling/CSN2019

        Ben
--
ben@salilab.org                      https://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
        - Sir Arthur Conan Doyle