On 1/9/20 12:07 PM, Andrea Graziadei wrote: > I am wondering how to extract localisation probability densities from a > list of RMF files and density ranges? The "actin tutorial" code results > in densities that are not in the same reference frame as the models, > making it impossible to add the LPDs of the selected cluster to an ihm > model, or to view them on top of the rmfs.
The actin tutorial uses an older version of the protocol at https://github.com/salilab/imp-sampcon, so you can just use the latest version of that protocol, which includes a fix for the reference frame issue you've noted (https://github.com/salilab/imp-sampcon/issues/2).
We will also update the actin tutorial to use this fixed code (https://github.com/salilab/actin_tutorial/issues/2).
Ben