Hi Mateusz,

If you open the map and your structures in their initial positions in Chimera, are they close in space to the map? For Multifit, the initial structures must be close to the box of the map. Maybe this is the reason.

See my previous response for explanations:


On 30 Nov 2015, at 20:15, Ben Webb <ben@salilab.org> wrote:

On 11/24/15 4:33 AM, Mateusz KoryciƄski wrote:
Was anyone able to build 1e6v example?

I was trying to model complex I am currently working on, however with no
luck. To test the software I've tried to model example 1e6v, provided
along with the source code. Multifit align step produced
asmb.combinations file with "NO SOLUTIONS FOUND".

MultiFit is rather sensitive to the set of input parameters you feed it. But Keren, the author of MultiFit, is working to remedy this and may be able to help you.

ben@salilab.org                      https://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
- Sir Arthur Conan Doyle
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