Hi everyone,
I get this error when I run "make -j 8" both with devel version from git and with the 2.1.0 version from the web:
/home/platypus/imp_dev/tools/doxygen/bin/doxygen: 1: /home/platypus/imp_dev/tools/doxygen/bin/doxygen: Syntax error: "(" unexpected make[2]: *** [doxygen/base/tags] Error 2 make[1]: *** [modules/base/CMakeFiles/IMP.base-doc.dir/all] Error 2 make[1]: *** Waiting for unfinished jobs...
I do not get that error with 2.0.1 version, but I need the RMF module to work well and I read that only works with last version...
thanks a lot in advance,
Ibai Irastorza Azkarate, PhD Student Centro Andaluz de Biología del Desarrollo CABD Universidad Pablo de Olavide, Carretera de Utrera km1, 41013 Sevilla, Spain http://www.cabd.es/en-research_groups-104-247-microbiology-s-platypus-summar...
On 03/31/2014 06:53 AM, Ibai Irastorza wrote: > /home/platypus/imp_dev/tools/doxygen/bin/doxygen: 1: > /home/platypus/imp_dev/tools/doxygen/bin/doxygen: Syntax error: "(" > unexpected
What does the file /home/platypus/imp_dev/tools/doxygen/bin/doxygen look like? This is supposed to be the doxygen binary (if you don't have doxygen on your system, it gets downloaded into tools/doxygen/). But it looks like something is confused there...
Ben
Hi,
May sound funny, but I had this issue on new ubuntu a half a year ago and I solved this issue on ubuntu by installing with no network connection so the download did not work (there was some incompatibilities with doxygen installed on the system or sth like that, I did not follow in detail).
Jan
On 03/31/2014 11:36 PM, Ben Webb wrote: > On 03/31/2014 06:53 AM, Ibai Irastorza wrote: >> /home/platypus/imp_dev/tools/doxygen/bin/doxygen: 1: >> /home/platypus/imp_dev/tools/doxygen/bin/doxygen: Syntax error: "(" >> unexpected > > What does the file /home/platypus/imp_dev/tools/doxygen/bin/doxygen > look like? This is supposed to be the doxygen binary (if you don't > have doxygen on your system, it gets downloaded into tools/doxygen/). > But it looks like something is confused there... > > Ben
On 4/1/14, 12:10 AM, Jan Kosinski wrote: > May sound funny, but I had this issue on new ubuntu a half a year ago > and I solved this issue on ubuntu by installing with no network > connection so the download did not work (there was some > incompatibilities with doxygen installed on the system or sth like that, > I did not follow in detail).
Should be fixed now in git; see https://github.com/salilab/imp/issues/779
Ben
participants (3)
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Ben Webb -
Ibai Irastorza -
Jan Kosinski