installation issue: cgal version 10.dylib missing
After installation of IMP via homebrew, 'import IMP' fails because it can’t find /usr/local/lib/libCGAL.10.dylib
I have verison 11.dylib installed. ls /usr/local/lib/libCGAL* produces
/usr/local/lib/libCGAL.11.0.0.dylib /usr/local/lib/libCGAL.11.dylib /usr/local/lib/libCGAL.dylib /usr/local/lib/libCGAL_Core.11.0.0.dylib /usr/local/lib/libCGAL_Core.11.dylib /usr/local/lib/libCGAL_Core.dylib And suggestions would be helpful.
Thanks, ~John Robinson
On 11/13/2015 12:21 AM, John Robinson wrote: > After installation of IMP via homebrew, 'import IMP' fails because it > can’t find /usr/local/lib/libCGAL.10.dylib
This suggests that you "brew install"ed IMP and CGAL, and then at some point upgraded CGAL. "brew reinstall imp" should fix that.
Ben
Thanks Ben,
I ended up removing all python installations (including pyenv shims) and doing everything under the native python install in /usr/bin. After installing from binary, things worked.
~John --------------------------------------------------------------------------------------------------------------------- John Robinson MD, PhD | Assistant Professor | South Dakota State University Dept. Chemistry & Biochemistry | SAV371, Box 2202 | Brookings SD 57007-0896 | USA Tel: +1-605-691-6305 | eMail: john.robinson@myofilament.org mailto:john.robinson@myofilament.org | URL: myofilament.org http://myofilament.org/
https://www.linkedin.com/pub/john-robinson-md-phd/b/a18/a92 https://twitter.com/drjmrobinson https://twitter.com/drjmrobinson > On Nov 13, 2015, at 2:08 PM, Ben Webb ben@salilab.org wrote: > > On 11/13/2015 12:21 AM, John Robinson wrote: >> After installation of IMP via homebrew, 'import IMP' fails because it >> can’t find /usr/local/lib/libCGAL.10.dylib > > This suggests that you "brew install"ed IMP and CGAL, and then at some point upgraded CGAL. "brew reinstall imp" should fix that. > > Ben > -- > ben@salilab.org https://salilab.org/~ben/ > "It is a capital mistake to theorize before one has data." > - Sir Arthur Conan Doyle > _______________________________________________ > IMP-users mailing list > IMP-users@salilab.org > https://salilab.org/mailman/listinfo/imp-users
participants (2)
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Ben Webb
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John Robinson