Is ConnectivityRestraint really deprecated? What to use instead?
Dear all,
When running several examples like connectivity_restraint.py from core/examples or nup84_complex_in_bead_representation.py from restrainer examples I see warnings like:
WARNING: Restraint is deprecated.
Is this restraint really deprecated? What do you recommend to use instead?
Thanks in advance, Jan
Sorry, it is a bad warning message. The next line should be more helpful. The deprecated bit is not passing the model in the constructor.
I'm trying to figure out how to improve them.
On Jun 27, 2013, at 10:51 AM, Jan Kosinski kosinski@embl.de wrote:
> Dear all, > > When running several examples like connectivity_restraint.py from core/examples or nup84_complex_in_bead_representation.py from restrainer examples I see warnings like: > > WARNING: Restraint is deprecated. > > Is this restraint really deprecated? What do you recommend to use instead? > > Thanks in advance, > Jan > -- > Jan Kosinski, PhD > Structural and Computational Biology Unit > European Molecular Biology Laboratory (EMBL) > Meyerhofstrasse 1 > 69117 Heidelberg > Germany > _______________________________________________ > IMP-users mailing list > IMP-users@salilab.org > https://salilab.org/mailman/listinfo/imp-users
participants (2)
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Daniel Russel -
Jan Kosinski