Yeah, the directions are slightly different (as you saw) between the release and develop. Not sure how best to make that clear. I'll see if I can make it give a clearer warning if the RMF_source dir is empty.

On Jul 9, 2013, at 12:22 AM, Dan Cohen bojemoi@gmail.com wrote:

> Thank you! This was indeed the problem, now IMP has been fully built. > > I was using this : > > http://www.integrativemodeling.org/2.0.1/doc/html/installation.html > > Which does not mention this step. > > Thank you again, > Dany > > > On 9 July 2013 02:02, Daniel Russel drussel@gmail.com wrote: > It sounds a lot like you didn't do "./setup_git.py" or another command to pull in the RMF submodule. What directions were you following? They might need to be updated. > > On Jul 8, 2013, at 2:13 PM, Dan Cohen bojemoi@gmail.com wrote: > >> Hello all, >> >> I tried to build IMP on an ubuntu 12.04 by going over the directions in your site. >> These are the directions I used : >> Building IMP from source is straightforward if the prerequisites are already installed. We recommend you get IMP from git by git clone git://github.com/salilab/imp.git To build, create a directory to build IMP in (it is good practice not to build in the source directory and do) >> >> cmake ../imp -DCMAKE_BUILD_TYPE=Release >> make -j 4 >> The only change I did was to disable Doxygen. >> I did the git clone about 12 hours ago. >> >> The build runs OK until it fails on one of the swig creation phases : >> >> [ 70%] Built target _IMP_symmetry >> [ 70%] Built target imp_symmetry_python >> [ 71%] Built target _IMP_atom >> [ 72%] Built target imp_atom_python >> [ 72%] Built target _IMP_scratch >> [ 73%] Built target imp_scratch_python >> [ 73%] Built target _IMP_em >> [ 73%] Built target imp_em_python >> [ 73%] Built target _IMP_kinematics >> [ 74%] Built target imp_kinematics_python >> [ 75%] Built target _IMP_misc >> [ 75%] Built target imp_misc_python >> [ 75%] Running swig on rmf >> Traceback (most recent call last): >> File "/home/bojemoi/university/imp-source/tools/build/make_swig_wrapper.py", line 94, in <module> >> main() >> File "/home/bojemoi/university/imp-source/tools/build/make_swig_wrapper.py", line 87, in main >> run_swig(outputdir, options) >> File "/home/bojemoi/university/imp-source/tools/build/make_swig_wrapper.py", line 44, in run_swig >> ret = tools.run_subprocess(args, cwd=outputdir) >> File "/home/bojemoi/university/imp-source/tools/build/tools.py", line 465, in run_subprocess >> % (ret, " ".join(command))) >> OSError: subprocess failed with return code 1: swig -castmode -interface _IMP_rmf -DPySwigIterator=IMP_RMF_PySwigIterator -DSwigPyIterator=IMP_RMF_SwigPyIterator -python -c++ -naturalvar -fvirtual -Wextra -I../../include -I../../swig -oh wrap.h-in -o wrap.cpp-in -I/home/bojemoi/university/imp-release/include -I/usr/include /home/bojemoi/university/imp-release/swig/IMP_rmf.i >> make[2]: *** [src/rmf_swig/wrap.cpp] Error 1 >> make[1]: *** [modules/rmf/pyext/CMakeFiles/_IMP_rmf.dir/all] Error 2 >> make: *** [all] Error 2 >> >> When trying to execute the same command myself (the swig command that fails with error code 1) I get : >> >> >> bojemoi@linux:~/university/imp-release$ swig -castmode -interface _IMP_rmf -DPySwigIterator=IMP_RMF_PySwigIterator -DSwigPyIterator=IMP_RMF_SwigPyIterator -python -c++ -naturalvar -fvirtual -Wextra -I../../include -I../../swig -oh wrap.h-in -o wrap.cpp-in -I/home/bojemoi/university/imp-release/include -I/usr/include /home/bojemoi/university/imp-release/swig/IMP_rmf.i >> >> /home/bojemoi/university/imp-release/swig/IMP_rmf.impl.i:1: Error: Unable to find 'RMF.i' >> >> Many other modules that do not relate to RMF.i build correctly and I can import them from python , but I happen to need multfit that DOES require RMF... >> >> I tried to search for RMF.i in my release directory : >> >> bojemoi@linux:~/university/imp-release$ find | grep RMF >> ./include/IMP/rmf/RMFWriter.h >> ./data/build_info/RMF >> >> bojemoi@linux:~/university/imp-release$ cat data/build_info/RMF >> ok=True >> includepath="" >> swigpath="" >> libpath="" >> >> >> >> Swig version is 2.0.4 by the way. >> >> Thank you! >> Dany >> _______________________________________________ >> IMP-users mailing list >> IMP-users@salilab.org >> https://salilab.org/mailman/listinfo/imp-users > > > _______________________________________________ > IMP-users mailing list > IMP-users@salilab.org > https://salilab.org/mailman/listinfo/imp-users > > > _______________________________________________ > IMP-users mailing list > IMP-users@salilab.org > https://salilab.org/mailman/listinfo/imp-users