Thanks ever so much! I spent a LOT of time looking at the file names - cross-eyed, obviously. SO embarrassing.

Irene

----- Original Message -----
From: Modeller Caretaker <modeller-care@salilab.org>
Date: Wednesday, March 7, 2012 7:40 am
Subject: Re: [modeller_usage] Modeller9.10 on Centos 6.2
To: Irene Newhouse <irenenew@hawaii.edu>
Cc: modeller_usage@salilab.org

> On 3/7/12 9:13 AM, Irene Newhouse wrote:
> > openf______E> Cannot open file cp6s.ali: No such file or directory
> ...
> > [newhoir@hals cpt6short]$ ls *ali
> >
> > My .py file is:
> >
> > cps6.alifrom modeller import *
>
> Either you mistyped something here, or your alignment file is
> called
> 'cps6.ali'. That's not the same as 'cp6s.ali'.
>
> Ben Webb, Modeller Caretaker
> --
> modeller-
> care@salilab.org http://www.salilab.org/modeller/
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