Hello,

I have used the standard analysis to perform homology modeling. I have two questions now

1- I want to plot the DOPE energy plot between the template and the model but after running the evaluate_model.py , I only have one TvLDH.profile. So how can I get the other profile to be able to plot this figure?

2- what other plot I can make from the outputs ? I appreciate if one can refer me to a paper or something

Thanks

Mohammad