Dear Modellers!!:
Is any expertise in the use of the command SEQUENCE_SEARCH ? All the time I use, the program stop trying to read the CHAINS_all.seq file. Is any kind of problem in the file? I will appreciate any help in this task. Thanks in advance:
Jorge H.F.
Top file is:
INCLUDE SET OUTPUT_CONTROL = 1 1 1 1 1 SET ATOM_FILES_DIRECTORY = '/export/db/pdb' SET OUTPUT = 'SHORT' # 'LONG' SET SIGNIF_CUTOFF = 8 3 SET SEARCH_RANDOMIZATIONS = 10 SET STOP_ON_ERROR = 2 SET FAST_SEARCH = ON SET DATA_FILE = ON CALL ROUTINE = 'sequence_srch', SEGFILE = 'DNApol.txt', SEQUENCE = 'DNApol'
The .log file all the time stop in the :
BLA, BLA, BLA, Open 11 OLD SEQUENTIAL ${MODINSTALL6v2}/modlib//CHAINS_3.0_40_XN.cod Dynamically allocated memory at amaxchn [B,kB,MB]: 2306323 2252.269 2.199 openf5__224_> Open 11 OLD SEQUENTIAL ${MODINSTALL6v2}/modlib//CHAINS_3.0_40_XN.cod openf5__224_> Open 11 OLD SEQUENTIAL ${MODINSTALL6v2}/modlib//CHAINS_all.seq