Dear users,<br><br><span lang="en"><span>I</span> <span>have</span> <span>four</span> similar structures<span></span></span>. They are aaa.pdb, bbb.pdb, ccc.pdb and ddd.pdb. Unfotunately, the first 15 residues of <span lang="en"><span>of all the structures</span></span> are missing.  I modelled the aaa.pdb using aaa.pdb, bbb.pdb, ccc.pdb and ddd.pdb. When I modelled aaa.pdb, a loop of aaa.pdb goes through the rest of the protein. i.e. occurs knot.<br>


<div><div dir="ltr" style="zoom:1"><span lang="en"><span></span></span></div></div><span dir="ltr"></span><span dir="ltr">My friend said &quot;you should leave out the termini&quot;</span>. <span dir="ltr">How will I leave out termini of a structure with Modeller</span>? What do you suggest?<br clear="all">

<br>Thanks in advance<br><br>-- <br>Ahmet Yıldırım<br>