Re: [modeller_usage] Error" Array too small. Increase MAXBND"

On Tue, Oct 26, 2004 at 02:32:47PM -0400, Youbin Tu wrote: > Anyone has met such an error " Array too small. Increase MAXBND"? > I was trying to build a small ligand into the model, it seems that > sth wrong with the process of creating topology. I tried both > modeler6vs2 and modeler7v7, unfortunately they gave the same errors.

Your model has more bonds than Modeller is expecting; it expects there to be no more bonds than atoms. You cannot increase MAXBND directly, but you can increase MAXRES, which should increase MAXBND correspondingly. See http://salilab.org/archives/modeller_usage/2004/msg00262.html

Ben Webb, Modeller Caretaker