Re: [modeller_usage] Disulfide bridge between residues into different monomers

12 Dec 2014


      On 12/11/2014 11:39 PM, bharat lal wrote:
> I am working on a decameric protein and want to create disulfide bridge
> between cysteines of adjacent monomers.
...
> KeyError: 'No such residue: 44:D'
Not sure how this message could be any more clear - you don't have a 
residue 44 in chain D. Remember that Modeller always numbers from 1. Try 
building a model without any bridges and look at the output file to see 
the numbering.
Ben Webb, Modeller Caretaker
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