[modeller_usage] ligand modeling in binding site of protein

hi i am doing ligand modeling in protein active site i run ligand/multiple-hetero.py script but geting errors it reads the pdb file but at the restraints line it shows one or more atoms not found in model

Mahendra Eknath Awale Institute Scholar M. S. (Pharm.) Dept.of Pharmacoinformatics National Institute of Pharmaceutical Education and Research NIPER S.A.S.Nagar, Mohali, Punjab-160062 INDIA. Institute Web http://www.niper.gov.in/

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