Hi<div>      when i am running compare.py. i am getting this error.</div><div><br></div><div><br></div><div><div>Traceback (most recent call last):</div><div>  File &quot;compare_1.py&quot;, line 32, in ?</div><div>    aln.malign3d()</div>
<div>  File &quot;/usr/lib/modeller9v8/modlib/modeller/alignment.py&quot;, line 329, in malign3d</div><div>    edit_file_ext)</div><div>_modeller.ModellerError: fit2xyz_296E&gt; Number of equivalent positions &lt; 3:        1</div>
</div><div><br></div><div><br></div><div>in this particular i am taking 12 template to making alignment.ali . but as soon as when i am starting with two, three, means any random number of template to make my alignment.ali its working.  </div>
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