Hi everyone,<div><br></div><div>I am working on the example given in the modeller tutorial <a href="http://salilab.org/modeller/wiki/Missing%20residues">http://salilab.org/modeller/wiki/Missing%20residues</a>. I used the exact same script to generate the sequence file. Instead of the given pdb1qg8.ent , I used the 1qg8.pdb downloaded from <a href="http://www.rcsb.org">www.rcsb.org</a>.  When I ran the script it resulted in the following sequence file (1qg8.seq)</div>
<div><br></div><div><div><br></div><div>&gt;P1;1qg8</div><div>structureX:1qg8:   2 :A:+238 :A:MOL_ID  1; MOLECULE  SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN SPSA; CHAIN  A; ENGINEERED  YES; OTHER_DETAILS  GLYCEROL MAGNESIUM:MOL_ID  1; ORGANISM_SCIENTIFIC  BACILLUS SUBTILIS; GENE  SPSA; EXPRESSION_SYSTEM  ESCHERICHIA COLI; EXPRESSION_SYSTEM_STRAIN  BL 21: 1.50: 0.16</div>
<div>PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKTR</div><div>YAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNDIVKETVRPAAQVTWNAP</div><div>CAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFYPFYPLDEELDLNYITEFVRNLPPQRNC</div>
<div>RELRESLKKLGMG*</div></div><div><br></div><div>In the field 5, it says +238 whereas in the tutorial, in the resulting 1qg8.seq file it shows 256. Have I done any mistake? Would the above sequence file work just as fine as the one shown in the tutorial?</div>
<div><br></div><div>Thank you</div><div><br></div><div>Sajeewa Dewage</div>