Amanda Moraes wrote: > I have another question: the sequences in PIR file .. do they all have > to have the same size? I´m asking because my templates have different > sizes and align in different places... what should I do? Even if I tell > modeller where to start and to end, the sequences selected are not the > same size... is that a problem?
No; the sequences can be any length and align at any place against your target sequence (to be modeled).
Ben Webb, Modeller Caretaker