I have a question regarding the e-values used in the build_profile. When I set the e-value less then 6, no sequences are found, but for higher e-values (with high numbers of iterations) several sequences are found that have e-values less than 1. What is the reason? 
Thank you. 

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Lilit Nersisyan
Institute of Molecular Biology NAS RA 
E-mail: txgt.lilit.nersisyan@gmail.com
Tel.: +37494 601703