Hi Geoff,

I wonder if Structuropedia might help:

It is essentially MODELLER made simple. Give it a try. Just copy and paste your sequence. Simple as that.

With warmest regards,

AMJAD FAROOQ PhD DIC | Associate Professor
Dept of Biochemistry,
University of Miami School of Medicine
Location:  Gautier Building, Suite 217
  1011 NW 15th Street #217, Miami , FL 33136, USA
amjad@farooqlab.net | 305-243-2429
| structuropedia.org

On Wed, Dec 10, 2014 at 5:22 PM, Geoffrey Lippa <glippa@hwi.buffalo.edu> wrote:
Hi all,

I was hoping to get some help on the modeling of a protein target by sequence alignment using a 41% similar structure template I recently solved, in place of a published structure on the PDB.  The resolution has changed and may help create a more accurate model for ligand docking.  Thanks.


Dr. Geoffrey Lippa
Post-doctoral Research Associate
Laboratory of Dr. Andrew Gulick
Hauptman Woodward Medical Research Institute
700 Ellicott St., Buffalo, NY 14203
Phone: 585-690-0850
Email: glippa@hwi.buffalo.edu
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