Modeller should be able to do this, but if your intent is to just add sidechains and not change backbone at all, I would suggest SCWRL:
http://dunbrack.fccc.edu/SCWRL3.php
Other useful servers:
http://bioserv.rpbs.jussieu.fr/cgi-bin/SCit http://eudoxus.scs.uiuc.edu/r3.html http://irecs.bioinf.mpi-inf.mpg.de/
At 03:45 AM 5/28/2008, matziast@med.uth.gr wrote: >Hi, >I have a problem with the model building. Specifically, I have the coordinates >of the backbone and I want to add its sidechains but I can't find the >appropriate script. If someone knows the name of the script, tell me. >Thank you in advance, >Maria. >_______________________________________________ >modeller_usage mailing list >modeller_usage@salilab.org >https://salilab.org/mailman/listinfo/modeller_usage
========================================================================== | Mensur Dlakic, PhD | Tel: (406) 994-6576 | | Department of Microbiology | Fax: (406) 994-4926 | | Montana State University | Lab: (406) 994-6237 | | 109 Lewis Hall, P.O. Box 173520 | http://myprofile.cos.com/mensur | | Bozeman, MT 59717-3520 | E-mail: mdlakic@montana.edu | ==========================================================================