On Tue, Aug 4, 2015 at 11:07 AM, Pawan K. Gupta pawanpharma79@yahoo.co.in wrote: > Could not find platform independent libraries <prefix> > Could not find platform dependent libraries <exec_prefix> > Consider setting $PYTHONHOME to <prefix>[:<exec_prefix>] > 'import site' failed; use -v for traceback
That looks like there is a problem with your Modeller installation. Which operative system are you using?
> File "Sec-struct-restrain-copy.py", line 10 > def special_restraints(self, aln): > ^ > IndentationError: expected an indented block
As the error says, the indentation is wrong. It should be:
class MyModel (automodel): def special_restraints(self, aln): rsr.add(secondary_structure.alpha(self.residue_range(’10:’, ’30:’)))
Note that in Python indentation is part of the semantics.
/David.