Re: [modeller_usage] modeller ga341 score

jo hanna wrote: > After having built my models, i have decided to assess them using the > ga341 score.

> the ouput of this script for two different models is: > > model1 > GA341 score : 1.000000 > > model2 > GA341 score : 1.000000 > > how do i interpret these outputs? should both scores be 1?

GA341 is not sufficiently sensitive to distinguish between two 'very good' models. Any good model will give a score very close to 1 (e.g. running GA341 on most PDB structures will give a 1.0 score). You should use it only to discard 'bad' models (e.g. those with score less than 0.6). DOPE may be more sensitive in your case.

Ben Webb, Modeller Caretaker