On 9/30/14, 7:53 AM, Vinicius Seus wrote: > I have a problem with build_profile.py. It runs fine but the output file > only appear one line about my target sequence. It doesn´t appear about > the molecules from my database (seqdump.pir). There is an warning in the > midlle of the process that say this: > > regress_656W> Number of bins for histogram too small - results maybe > unreliable, nbins: 4 > regress_656W> Number of bins for histogram too small - results maybe > unreliable, nbins: 4 > regress_656W> Number of bins for histogram too small - results maybe > unreliable, nbins: 4
Your database is too small, so it can't calculate e-values. Normally build_profile is used to scan against a large database (PDB or UniProt).
Ben Webb, Modeller Caretaker