Dear All,<br> <br> With MODELLER, I wonder if it is possible to use different template(s) for different region of one target protein.&nbsp; For example,&nbsp; One protein has domain 1, 2 and 3.&nbsp; I would like to construct a complete model of this protein,&nbsp; with templates A and B for domain 1, templates C,D,and E for domain 3,&nbsp; and domain 2 already has coordinates/structure, which need to be preserved in the complete model.<br> <br> Is there any way to do the above?&nbsp; If so, how?&nbsp; I tried to use the "inifile" feature and use the existing coordinate file of domain 2 as "inifile".&nbsp; while I got error message of " Atom index is out of range (iatm,natm)".<br> <br> Any help/information will be very much appreciated.<br> <br> Shirley<br> <br> <br> <p>
	
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