I tried to apply the
script mutate_model.py to introduce a single point mutation on a protein, and I
obtained an error: I'm attaching here the .log file.
From the error
message, I see that mutate_model seems to be unable to manage a protein with
chain breaks. I can obviously follow the suggestion and relabel the chains of my
protein; however, chain breaks are a quite common situation in PDB
files, therefore I wonder if there is a way to correct this problem without
changing the chain ID as suggested in the log file (which is formally uncorrect
since I don't have multiple chains in my protein).
Any help will be
Many thanks in
advance and best regards
Anna Marabotti, Ph.D.
Laboratory of Bioinformatics and
Institute of Food Science -
Via Roma, 64
Phone: +39 0825 299651
Fax: +39 0825 781585
Skype account: annam1972
"When a man with a gun meets a man with
a pen, the man with the gun is a dead man"