Re: [modeller_usage] weight restraints

On 5/27/10 11:28 AM, Roberto Sanchez wrote: > Couldn't one approximate template weighting in a "dirty" way by using > multiple copies of a template in the alignment file? i.e. if template t1 > is included in the alignment twice (or maybe even just named twice in > the 'knowns' list in the script, not sure about this) and t2 is used > only once, then effectively the t1 restraint values have twice the > probability of the t2 restraint values (everything else being equal). > Ben, do you think this would work?

Yes, that should work (either way), but like you say, it's dirty. And it still uses the original Modeller weighting scheme - it may be that Armin wants to change that.

Ben Webb, Modeller Caretaker